Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 AC006058.3-201ENST00000606217 1069 ntBASIC18.33■□□□□ 0.52
LGSNQ5TDP6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 AC096733.2-201ENST00000609937 1394 ntBASIC18.32■□□□□ 0.52
LGSNQ5TDP6 SDHAP2-201ENST00000455183 2001 ntBASIC18.32■□□□□ 0.52
LGSNQ5TDP6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 CA15P1-201ENST00000481698 905 ntBASIC18.32■□□□□ 0.52
LGSNQ5TDP6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 KRT18P6-201ENST00000555540 1265 ntBASIC18.32■□□□□ 0.52
LGSNQ5TDP6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 AC006116.8-202ENST00000587620 1550 ntBASIC18.32■□□□□ 0.52
LGSNQ5TDP6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.32■□□□□ 0.52
LGSNQ5TDP6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGSNQ5TDP6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGSNQ5TDP6 KRT8P7-201ENST00000533003 1432 ntBASIC18.31■□□□□ 0.52
LGSNQ5TDP6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 AC009065.1-201ENST00000564055 1225 ntBASIC18.3■□□□□ 0.52
LGSNQ5TDP6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 DGCR10-201ENST00000609839 495 ntBASIC18.3■□□□□ 0.52
LGSNQ5TDP6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LGSNQ5TDP6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms