Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.17■□□□□ 0.66
CHKAP35790 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.17■□□□□ 0.66
CHKAP35790 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.17■□□□□ 0.66
CHKAP35790 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.17■□□□□ 0.66
CHKAP35790 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHKAP35790 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.17■□□□□ 0.66
CHKAP35790 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHKAP35790 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.17■□□□□ 0.66
CHKAP35790 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.17■□□□□ 0.66
CHKAP35790 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.16■□□□□ 0.66
CHKAP35790 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.16■□□□□ 0.66
CHKAP35790 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CHKAP35790 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHKAP35790 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.16■□□□□ 0.66
CHKAP35790 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.16■□□□□ 0.66
CHKAP35790 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHKAP35790 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHKAP35790 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHKAP35790 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.15■□□□□ 0.66
CHKAP35790 AL645929.1-201ENST00000420084 975 ntBASIC19.15■□□□□ 0.66
CHKAP35790 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHKAP35790 AC009065.1-201ENST00000564055 1225 ntBASIC19.15■□□□□ 0.66
CHKAP35790 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.15■□□□□ 0.66
CHKAP35790 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 AL357033.4-201ENST00000617703 1807 ntBASIC19.15■□□□□ 0.66
CHKAP35790 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.15■□□□□ 0.66
CHKAP35790 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHKAP35790 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 ESPNP-201ENST00000270691 2015 ntBASIC19.15■□□□□ 0.66
CHKAP35790 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHKAP35790 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.15■□□□□ 0.66
CHKAP35790 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.15■□□□□ 0.66
CHKAP35790 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHKAP35790 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CHKAP35790 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHKAP35790 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CHKAP35790 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.14■□□□□ 0.66
CHKAP35790 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHKAP35790 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.14■□□□□ 0.65
CHKAP35790 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
CHKAP35790 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
CHKAP35790 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.14■□□□□ 0.65
CHKAP35790 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.14■□□□□ 0.65
CHKAP35790 HLA-F-220ENST00000434407 884 ntBASIC19.14■□□□□ 0.65
CHKAP35790 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 SPDYE13P-201ENST00000445314 798 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms