Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 AL353692.3-201ENST00000407031 1396 ntBASIC16.49■□□□□ 0.23
FREM3P0C091 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.48■□□□□ 0.23
FREM3P0C091 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM3P0C091 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 AL121894.2-201ENST00000602977 491 ntBASIC16.48■□□□□ 0.23
FREM3P0C091 AL390719.2-201ENST00000606993 987 ntBASIC16.48■□□□□ 0.23
FREM3P0C091 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FREM3P0C091 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 LINC01126-201ENST00000623515 1646 ntBASIC16.48■□□□□ 0.23
FREM3P0C091 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM3P0C091 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM3P0C091 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM3P0C091 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM3P0C091 AP003733.1-201ENST00000491725 852 ntBASIC16.48■□□□□ 0.23
FREM3P0C091 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
FREM3P0C091 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM3P0C091 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.47■□□□□ 0.23
FREM3P0C091 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.47■□□□□ 0.23
FREM3P0C091 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.47■□□□□ 0.23
FREM3P0C091 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.47■□□□□ 0.23
FREM3P0C091 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FREM3P0C091 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.47■□□□□ 0.23
FREM3P0C091 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.47■□□□□ 0.23
FREM3P0C091 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM3P0C091 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
FREM3P0C091 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.46■□□□□ 0.23
FREM3P0C091 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 AC246785.2-201ENST00000432512 513 ntBASIC16.46■□□□□ 0.23
FREM3P0C091 AC104819.1-201ENST00000504587 486 ntBASIC16.46■□□□□ 0.23
FREM3P0C091 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.46■□□□□ 0.23
FREM3P0C091 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.46■□□□□ 0.23
FREM3P0C091 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.46■□□□□ 0.23
FREM3P0C091 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.46■□□□□ 0.23
FREM3P0C091 RN7SL510P-201ENST00000581311 263 ntBASIC16.46■□□□□ 0.23
FREM3P0C091 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FREM3P0C091 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
FREM3P0C091 AL354751.1-201ENST00000412768 1863 ntBASIC16.46■□□□□ 0.23
FREM3P0C091 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.46■□□□□ 0.23
FREM3P0C091 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FREM3P0C091 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.46■□□□□ 0.23
FREM3P0C091 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms