Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.91■□□□□ 0.62
LRCH4O75427 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.91■□□□□ 0.62
LRCH4O75427 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH4O75427 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH4O75427 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 DUTP2-201ENST00000519164 463 ntBASIC18.9■□□□□ 0.62
LRCH4O75427 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LRCH4O75427 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH4O75427 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.9■□□□□ 0.62
LRCH4O75427 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCH4O75427 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRCH4O75427 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.9■□□□□ 0.62
LRCH4O75427 KRT18P55-202ENST00000578578 1546 ntBASIC18.9■□□□□ 0.62
LRCH4O75427 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRCH4O75427 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
LRCH4O75427 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LRCH4O75427 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
LRCH4O75427 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRCH4O75427 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRCH4O75427 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LRCH4O75427 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LRCH4O75427 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.89■□□□□ 0.61
LRCH4O75427 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.89■□□□□ 0.61
LRCH4O75427 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.89■□□□□ 0.61
LRCH4O75427 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.89■□□□□ 0.61
LRCH4O75427 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.89■□□□□ 0.61
LRCH4O75427 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.89■□□□□ 0.61
LRCH4O75427 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
LRCH4O75427 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRCH4O75427 LETM1P2-201ENST00000597330 2178 ntBASIC18.89■□□□□ 0.61
LRCH4O75427 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.89■□□□□ 0.61
LRCH4O75427 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
LRCH4O75427 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRCH4O75427 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LRCH4O75427 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.88■□□□□ 0.61
LRCH4O75427 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.88■□□□□ 0.61
LRCH4O75427 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH4O75427 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRCH4O75427 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 LINC00602-201ENST00000629776 2065 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
LRCH4O75427 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRCH4O75427 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
LRCH4O75427 HLA-F-220ENST00000434407 884 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 KRT18P38-201ENST00000449496 1282 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 AC113404.2-201ENST00000507884 177 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
LRCH4O75427 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 AC024563.2-201ENST00000603282 481 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRCH4O75427 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 GNAS-203ENST00000306120 1878 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
LRCH4O75427 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms