Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP9BO43861 UPK3BP1-201ENST00000428678 509 ntBASIC18.82■□□□□ 0.6
ATP9BO43861 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP9BO43861 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP9BO43861 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP9BO43861 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ATP9BO43861 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP9BO43861 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP9BO43861 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP9BO43861 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP9BO43861 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 AP000997.3-201ENST00000623333 2250 ntBASIC18.81■□□□□ 0.6
ATP9BO43861 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP9BO43861 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP9BO43861 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP9BO43861 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP9BO43861 AL136038.4-201ENST00000603606 1261 ntBASIC18.81■□□□□ 0.6
ATP9BO43861 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 AC112777.1-201ENST00000540175 1423 ntBASIC18.81■□□□□ 0.6
ATP9BO43861 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP9BO43861 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP9BO43861 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 AL391807.1-203ENST00000604392 2365 ntBASIC18.81■□□□□ 0.6
ATP9BO43861 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP9BO43861 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP9BO43861 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP9BO43861 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP9BO43861 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
ATP9BO43861 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP9BO43861 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP9BO43861 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP9BO43861 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP9BO43861 KRT8P50-201ENST00000562022 1438 ntBASIC18.8■□□□□ 0.6
ATP9BO43861 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATP9BO43861 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP9BO43861 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP9BO43861 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP9BO43861 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP9BO43861 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP9BO43861 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms