Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 HOMER2P1-201ENST00000455653 964 ntBASIC19.38■□□□□ 0.69
DDX1Q92499 YBX1P2-201ENST00000489612 999 ntBASIC19.38■□□□□ 0.69
DDX1Q92499 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX1Q92499 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
DDX1Q92499 GPALPP1-207ENST00000611650 899 ntBASIC19.38■□□□□ 0.69
DDX1Q92499 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX1Q92499 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX1Q92499 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DDX1Q92499 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 AC132938.6-201ENST00000623828 1655 ntBASIC19.37■□□□□ 0.69
DDX1Q92499 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX1Q92499 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.37■□□□□ 0.69
DDX1Q92499 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX1Q92499 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX1Q92499 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX1Q92499 AC079602.3-201ENST00000623931 403 ntBASIC19.37■□□□□ 0.69
DDX1Q92499 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX1Q92499 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
DDX1Q92499 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.36■□□□□ 0.69
DDX1Q92499 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX1Q92499 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.36■□□□□ 0.69
DDX1Q92499 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
DDX1Q92499 AC069148.1-201ENST00000608741 768 ntBASIC19.36■□□□□ 0.69
DDX1Q92499 AC011558.1-201ENST00000623459 338 ntBASIC19.36■□□□□ 0.69
DDX1Q92499 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX1Q92499 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX1Q92499 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX1Q92499 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX1Q92499 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
DDX1Q92499 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX1Q92499 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX1Q92499 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX1Q92499 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.35■□□□□ 0.69
DDX1Q92499 RASA4DP-201ENST00000460726 1199 ntBASIC19.35■□□□□ 0.69
DDX1Q92499 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX1Q92499 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX1Q92499 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX1Q92499 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX1Q92499 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX1Q92499 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms