Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 MIR1238-201ENST00000408483 83 ntBASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 B3GAT3P1-201ENST00000471720 806 ntBASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 FITM1-202ENST00000559294 800 ntBASIC16■□□□□ 0.15
RAB40AQ8WXH6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 DGCR10-201ENST00000609839 495 ntBASIC16■□□□□ 0.15
RAB40AQ8WXH6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAB40AQ8WXH6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAB40AQ8WXH6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 MESTP1-201ENST00000404287 994 ntBASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 AC011506.1-201ENST00000474329 610 ntBASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 AC130371.2-201ENST00000619443 611 ntBASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 AC097493.4-201ENST00000641197 219 ntBASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms