Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 FZD10-202ENST00000539839 3282 ntBASIC18.9■□□□□ 0.62
CCDC89Q8N998 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC89Q8N998 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC89Q8N998 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.89■□□□□ 0.61
CCDC89Q8N998 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 AP005242.2-201ENST00000580065 1175 ntBASIC18.89■□□□□ 0.61
CCDC89Q8N998 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC89Q8N998 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC89Q8N998 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 AC009102.3-201ENST00000623118 1491 ntBASIC18.88■□□□□ 0.61
CCDC89Q8N998 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.88■□□□□ 0.61
CCDC89Q8N998 AL163051.1-201ENST00000569214 1512 ntBASIC18.88■□□□□ 0.61
CCDC89Q8N998 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC89Q8N998 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC89Q8N998 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CCDC89Q8N998 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC89Q8N998 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC89Q8N998 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC89Q8N998 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC89Q8N998 AP003071.4-201ENST00000562276 1284 ntBASIC18.87■□□□□ 0.61
CCDC89Q8N998 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC89Q8N998 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC89Q8N998 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms