Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 MYLKP1-201ENST00000509077 1580 ntBASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FBXO39Q8N4B4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 AL023284.2-201ENST00000405850 579 ntBASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 MCCD1P1-208ENST00000445732 328 ntBASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 AC083849.1-201ENST00000615227 514 ntBASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FBXO39Q8N4B4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 KRT18P41-201ENST00000518924 1277 ntBASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 AL133373.2-201ENST00000623187 2828 ntBASIC18.18■□□□□ 0.5
FBXO39Q8N4B4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 AC135776.1-201ENST00000319817 2481 ntBASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FBXO39Q8N4B4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms