Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 C2orf69P3-201ENST00000565542 1120 ntBASIC17.13■□□□□ 0.33
RNF130Q86XS8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 LINC00896-202ENST00000609602 2128 ntBASIC17.13■□□□□ 0.33
RNF130Q86XS8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 TMEM191A-211ENST00000637163 1067 ntBASIC17.13■□□□□ 0.33
RNF130Q86XS8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF130Q86XS8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF130Q86XS8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 LINC01126-201ENST00000623515 1646 ntBASIC17.12■□□□□ 0.33
RNF130Q86XS8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 AL355075.4-201ENST00000554988 638 ntBASIC17.12■□□□□ 0.33
RNF130Q86XS8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 AC112497.1-201ENST00000624824 639 ntBASIC17.12■□□□□ 0.33
RNF130Q86XS8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF130Q86XS8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
RNF130Q86XS8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 PRORSD1P-202ENST00000563365 2154 ntBASIC17.11■□□□□ 0.33
RNF130Q86XS8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 OR6D1P-202ENST00000641007 5290 ntBASIC17.11■□□□□ 0.33
RNF130Q86XS8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF130Q86XS8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF130Q86XS8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.1■□□□□ 0.33
RNF130Q86XS8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF130Q86XS8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF130Q86XS8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF130Q86XS8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF130Q86XS8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RNF130Q86XS8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms