Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 AC105020.1-201ENST00000435356 2205 ntBASIC15.14■□□□□ 0.01
ZNF546Q86UE3 AC124283.5-201ENST00000624661 1809 ntBASIC15.14■□□□□ 0.01
ZNF546Q86UE3 KRT8P45-201ENST00000414328 1447 ntBASIC15.14■□□□□ 0.01
ZNF546Q86UE3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 AC010980.2-201ENST00000587099 1412 ntBASIC15.14■□□□□ 0.01
ZNF546Q86UE3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PCDHA14-201ENST00000506751 2298 ntBASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ZNRF2P3-201ENST00000424200 374 ntBASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 AC068587.9-201ENST00000641814 219 ntBASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF546Q86UE3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 AC008741.2-201ENST00000612792 3115 ntBASIC15.12■□□□□ 0.01
ZNF546Q86UE3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 AL513477.1-201ENST00000602865 2407 ntBASIC15.12■□□□□ 0.01
ZNF546Q86UE3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 AC231657.2-201ENST00000624556 255 ntBASIC15.12■□□□□ 0.01
ZNF546Q86UE3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms