Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 AL589182.2-201ENST00000619332 1049 ntBASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SNAPC4Q5SXM2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC29.52■■■□□ 2.32
SNAPC4Q5SXM2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC29.51■■■□□ 2.32
SNAPC4Q5SXM2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.32
SNAPC4Q5SXM2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
SNAPC4Q5SXM2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
SNAPC4Q5SXM2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 IGHV3-65-201ENST00000523210 341 ntBASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNAPC4Q5SXM2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 CD99-202ENST00000381180 530 ntTSL 2 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 AC138761.1-201ENST00000584393 385 ntBASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 AC008667.4-201ENST00000607370 168 ntBASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNAPC4Q5SXM2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 AC010460.3-201ENST00000511359 1579 ntBASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms