Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV8-6A0A0B4J262 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV8-6A0A0B4J262 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 MTDHP1-201ENST00000605323 784 ntBASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 AC073648.6-201ENST00000641589 218 ntBASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 AL645608.8-201ENST00000606034 2086 ntBASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms