Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCDNQ9UBB6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 ABCD1P5-201ENST00000445663 754 ntBASIC18.02■□□□□ 0.48
NCDNQ9UBB6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 COX20P2-201ENST00000452636 358 ntBASIC18.02■□□□□ 0.48
NCDNQ9UBB6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 AC025062.2-201ENST00000605477 670 ntBASIC18.02■□□□□ 0.48
NCDNQ9UBB6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCDNQ9UBB6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 INTS4P1-201ENST00000438455 1935 ntBASIC18.02■□□□□ 0.47
NCDNQ9UBB6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.02■□□□□ 0.47
NCDNQ9UBB6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AC254562.1-201ENST00000417586 456 ntBASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AL139288.1-201ENST00000623748 933 ntBASIC18.01■□□□□ 0.47
NCDNQ9UBB6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 AP002414.3-201ENST00000589352 1468 ntBASIC18.01■□□□□ 0.47
NCDNQ9UBB6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCDNQ9UBB6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCDNQ9UBB6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18■□□□□ 0.47
NCDNQ9UBB6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms