Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 AL139288.1-201ENST00000623748 933 ntBASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 HLA-J-201ENST00000462773 1622 ntBASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 OR7E14P-202ENST00000530490 1290 ntBASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS4Q8IUM7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 AC025062.2-201ENST00000605477 670 ntBASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS4Q8IUM7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 AC104109.2-201ENST00000602919 1418 ntBASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 AC073130.3-201ENST00000624389 2278 ntBASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS4Q8IUM7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms