Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.34■□□□□ 0.69
BRCC3P46736 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCC3P46736 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCC3P46736 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCC3P46736 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCC3P46736 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
BRCC3P46736 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCC3P46736 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCC3P46736 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCC3P46736 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCC3P46736 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.33■□□□□ 0.69
BRCC3P46736 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRCC3P46736 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.33■□□□□ 0.69
BRCC3P46736 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRCC3P46736 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
BRCC3P46736 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCC3P46736 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCC3P46736 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.33■□□□□ 0.68
BRCC3P46736 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCC3P46736 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
BRCC3P46736 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCC3P46736 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.33■□□□□ 0.68
BRCC3P46736 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRCC3P46736 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCC3P46736 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BRCC3P46736 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.32■□□□□ 0.68
BRCC3P46736 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCC3P46736 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 POM121L3P-201ENST00000419331 1163 ntBASIC19.32■□□□□ 0.68
BRCC3P46736 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.32■□□□□ 0.68
BRCC3P46736 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.32■□□□□ 0.68
BRCC3P46736 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
BRCC3P46736 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BRCC3P46736 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCC3P46736 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.32■□□□□ 0.68
BRCC3P46736 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.32■□□□□ 0.68
BRCC3P46736 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRCC3P46736 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.32■□□□□ 0.68
BRCC3P46736 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BRCC3P46736 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 AC098818.2-201ENST00000564925 2320 ntBASIC19.31■□□□□ 0.68
BRCC3P46736 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRCC3P46736 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRCC3P46736 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.31■□□□□ 0.68
BRCC3P46736 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.31■□□□□ 0.68
BRCC3P46736 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.31■□□□□ 0.68
BRCC3P46736 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.31■□□□□ 0.68
BRCC3P46736 MIR5100-201ENST00000579544 119 ntBASIC19.31■□□□□ 0.68
BRCC3P46736 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
BRCC3P46736 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRCC3P46736 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCC3P46736 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BRCC3P46736 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCC3P46736 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCC3P46736 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms