Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 CLEC4GP1-201ENST00000596555 870 ntBASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HRH3Q9Y5N1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 HCG11-201ENST00000411553 5696 ntBASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HRH3Q9Y5N1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.29
HRH3Q9Y5N1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HRH3Q9Y5N1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HRH3Q9Y5N1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 AC012313.10-201ENST00000623509 926 ntBASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.83■□□□□ 0.28
HRH3Q9Y5N1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms