Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA3Q9Y5H0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 AC009113.1-201ENST00000570267 2443 ntBASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 AC004870.1-201ENST00000315132 882 ntBASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TSPY22P-201ENST00000427496 604 ntBASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 DRAXINP1-201ENST00000437611 948 ntBASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 AC104390.1-201ENST00000555663 520 ntBASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 AL390961.4-201ENST00000623958 2535 ntBASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA3Q9Y5H0 AL512353.2-201ENST00000448759 1962 ntBASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 KRT18P23-201ENST00000435622 1283 ntBASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 RCC2P3-201ENST00000418112 1537 ntBASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA3Q9Y5H0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms