Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 RNA5SP413-201ENST00000516373 109 ntBASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 AC130371.2-201ENST00000619443 611 ntBASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 AC034236.2-201ENST00000606662 1610 ntBASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.84□□□□□ -0.03
CTNNBIP1Q9NSA3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 PHGDH-209ENST00000641074 1780 ntBASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTNNBIP1Q9NSA3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTNNBIP1Q9NSA3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 CR392000.1-201ENST00000624770 1228 ntBASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.82□□□□□ -0.04
CTNNBIP1Q9NSA3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 MCCD1P1-208ENST00000445732 328 ntBASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTNNBIP1Q9NSA3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms