Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 AL133373.2-201ENST00000623187 2828 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 IER3-202ENST00000376377 1350 ntBASIC12.71□□□□□ -0.37
UPK3BQ9BT76 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 AC005332.1-201ENST00000577698 1310 ntBASIC12.71□□□□□ -0.37
UPK3BQ9BT76 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 AL049812.1-201ENST00000432563 2267 ntBASIC12.71□□□□□ -0.37
UPK3BQ9BT76 VENTXP5-201ENST00000523979 775 ntBASIC12.71□□□□□ -0.37
UPK3BQ9BT76 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK3BQ9BT76 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 AL139384.1-201ENST00000612143 3047 ntBASIC12.71□□□□□ -0.38
UPK3BQ9BT76 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.71□□□□□ -0.38
UPK3BQ9BT76 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 AC116407.4-201ENST00000623319 1061 ntBASIC12.7□□□□□ -0.38
UPK3BQ9BT76 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.7□□□□□ -0.38
UPK3BQ9BT76 Z98044.1-201ENST00000632503 1764 ntBASIC12.7□□□□□ -0.38
UPK3BQ9BT76 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK3BQ9BT76 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms