Protein–RNA interactions for Protein: Q96QP1

ALPK1, Alpha-protein kinase 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1Q96QP1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 AC113347.1-201ENST00000413321 391 ntBASIC17.19■□□□□ 0.34
ALPK1Q96QP1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 Z85996.1-201ENST00000494644 937 ntBASIC17.19■□□□□ 0.34
ALPK1Q96QP1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 LINC00896-202ENST00000609602 2128 ntBASIC17.19■□□□□ 0.34
ALPK1Q96QP1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 AC112777.1-201ENST00000540175 1423 ntBASIC17.19■□□□□ 0.34
ALPK1Q96QP1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.19■□□□□ 0.34
ALPK1Q96QP1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 AC005521.1-201ENST00000393351 872 ntBASIC17.18■□□□□ 0.34
ALPK1Q96QP1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ALPK1Q96QP1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 AL357033.4-201ENST00000617703 1807 ntBASIC17.17■□□□□ 0.34
ALPK1Q96QP1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 UNC93B2-201ENST00000285383 730 ntBASIC17.17■□□□□ 0.34
ALPK1Q96QP1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 KRT8P11-201ENST00000409686 1436 ntBASIC17.17■□□□□ 0.34
ALPK1Q96QP1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 KRT8P3-201ENST00000519669 1449 ntBASIC17.17■□□□□ 0.34
ALPK1Q96QP1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
ALPK1Q96QP1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALPK1Q96QP1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms