Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 TEX21P-204ENST00000641479 1693 ntBASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PKNOX2Q96KN3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 CICP20-201ENST00000443330 2801 ntBASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 PAUPAR-201ENST00000630360 2965 ntBASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 ABALON-201ENST00000629058 1903 ntBASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 AL512353.2-201ENST00000448759 1962 ntBASIC19.74■□□□□ 0.75
PKNOX2Q96KN3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 SUDS3P1-201ENST00000505831 966 ntBASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKNOX2Q96KN3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms