Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CICP14-201ENST00000629111 2732 ntBASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SPTSSBQ8NFR3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.02□□□□□ -0.81
SPTSSBQ8NFR3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 BX119927.1-201ENST00000636596 1552 ntBASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 OR2I1P-207ENST00000453522 948 ntBASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 BX005040.4-201ENST00000637145 1518 ntBASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SPTSSBQ8NFR3 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms