Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 ECEL1P3-201ENST00000427961 737 ntBASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD1LQ86WJ1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 MIR3917-201ENST00000580971 93 ntBASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 LINC00896-202ENST00000609602 2128 ntBASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD1LQ86WJ1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD1LQ86WJ1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms