Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 CRYGFP-201ENST00000418459 633 ntBASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 MFAP1P1-201ENST00000442257 1255 ntBASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 AP000525.1-201ENST00000608286 694 ntBASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ATPAF1Q5TC12 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 AC106820.2-201ENST00000563775 3264 ntBASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 SIRPAP1-201ENST00000448467 1770 ntBASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 KRT8P3-201ENST00000519669 1449 ntBASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ATPAF1Q5TC12 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms