Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBA4AP68366 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA4AP68366 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TUBA4AP68366 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA4AP68366 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA4AP68366 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TUBA4AP68366 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBA4AP68366 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA4AP68366 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TUBA4AP68366 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.34
TUBA4AP68366 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TUBA4AP68366 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBA4AP68366 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA4AP68366 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TUBA4AP68366 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBA4AP68366 UBE2SP1-201ENST00000450587 669 ntBASIC17.14■□□□□ 0.33
TUBA4AP68366 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA4AP68366 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA4AP68366 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TUBA4AP68366 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBA4AP68366 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBA4AP68366 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA4AP68366 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA4AP68366 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TUBA4AP68366 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA4AP68366 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBA4AP68366 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.13■□□□□ 0.33
TUBA4AP68366 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA4AP68366 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA4AP68366 YBX1P10-201ENST00000444752 975 ntBASIC17.13■□□□□ 0.33
TUBA4AP68366 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 AC093827.2-201ENST00000512654 315 ntBASIC17.13■□□□□ 0.33
TUBA4AP68366 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA4AP68366 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA4AP68366 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.13■□□□□ 0.33
TUBA4AP68366 AC004264.1-201ENST00000608354 794 ntBASIC17.13■□□□□ 0.33
TUBA4AP68366 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA4AP68366 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TUBA4AP68366 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TUBA4AP68366 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA4AP68366 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 AL162727.3-201ENST00000635661 2787 ntBASIC17.12■□□□□ 0.33
TUBA4AP68366 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TUBA4AP68366 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBA4AP68366 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA4AP68366 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBA4AP68366 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA4AP68366 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA4AP68366 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA4AP68366 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TUBA4AP68366 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA4AP68366 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA4AP68366 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA4AP68366 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms