Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC079602.3-201ENST00000623931 403 ntBASIC19.2■□□□□ 0.66
MMP8P22894 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.2■□□□□ 0.66
MMP8P22894 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MMP8P22894 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MMP8P22894 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP8P22894 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP8P22894 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP8P22894 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.19■□□□□ 0.66
MMP8P22894 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.19■□□□□ 0.66
MMP8P22894 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 STARP1-201ENST00000397973 869 ntBASIC19.19■□□□□ 0.66
MMP8P22894 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.19■□□□□ 0.66
MMP8P22894 KRT18P57-201ENST00000443599 1254 ntBASIC19.19■□□□□ 0.66
MMP8P22894 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
MMP8P22894 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.19■□□□□ 0.66
MMP8P22894 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.19■□□□□ 0.66
MMP8P22894 AC008687.5-201ENST00000593746 558 ntBASIC19.19■□□□□ 0.66
MMP8P22894 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
MMP8P22894 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.19■□□□□ 0.66
MMP8P22894 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP8P22894 AC132938.6-201ENST00000623828 1655 ntBASIC19.19■□□□□ 0.66
MMP8P22894 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MMP8P22894 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.19■□□□□ 0.66
MMP8P22894 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MMP8P22894 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MMP8P22894 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
MMP8P22894 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MMP8P22894 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MMP8P22894 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
MMP8P22894 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 AC006011.2-201ENST00000621313 1158 ntBASIC19.18■□□□□ 0.66
MMP8P22894 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MMP8P22894 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.18■□□□□ 0.66
MMP8P22894 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.18■□□□□ 0.66
MMP8P22894 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP8P22894 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP8P22894 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP8P22894 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 AL391807.1-203ENST00000604392 2365 ntBASIC19.17■□□□□ 0.66
MMP8P22894 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MMP8P22894 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MMP8P22894 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MMP8P22894 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP8P22894 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.17■□□□□ 0.66
MMP8P22894 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
MMP8P22894 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.17■□□□□ 0.66
MMP8P22894 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms