Protein–RNA interactions for Protein: P03901

MT-ND4L, NADH-ubiquinone oxidoreductase chain 4L, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4LP03901 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
MT-ND4LP03901 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND4LP03901 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND4LP03901 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND4LP03901 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND4LP03901 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 CYP21A1P-202ENST00000354927 1481 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L2-201ENST00000561772 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L6-201ENST00000626483 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L1-201ENST00000627662 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L8-201ENST00000629013 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L3-201ENST00000630187 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L7-201ENST00000630678 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 DUX4L5-201ENST00000630834 1275 ntBASIC14.34□□□□□ -0.11
MT-ND4LP03901 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND4LP03901 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND4LP03901 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
MT-ND4LP03901 AC022188.1-201ENST00000620960 1664 ntBASIC14.33□□□□□ -0.11
MT-ND4LP03901 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.33□□□□□ -0.11
MT-ND4LP03901 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND4LP03901 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MT-ND4LP03901 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CCDC92B-201ENST00000575506 885 ntBASIC14.33□□□□□ -0.12
MT-ND4LP03901 AC012354.3-201ENST00000623734 483 ntBASIC14.33□□□□□ -0.12
MT-ND4LP03901 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MT-ND4LP03901 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MT-ND4LP03901 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms