Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 LINC00602-201ENST00000629776 2065 ntBASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV13-2A0A0B4J235 AC018695.7-201ENST00000624587 2492 ntBASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 AC123595.1-201ENST00000440769 1046 ntBASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 AC068587.9-201ENST00000641814 219 ntBASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 PP12613-201ENST00000424958 2230 ntBASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV13-2A0A0B4J235 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AC006116.8-202ENST00000587620 1550 ntBASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AC046158.3-201ENST00000624947 2558 ntBASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms