Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 AC116407.4-201ENST00000623319 1061 ntBASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 MYLKP1-201ENST00000509077 1580 ntBASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 IER3-202ENST00000376377 1350 ntBASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF3C4Q9UKN8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 UPK3BP1-201ENST00000428678 509 ntBASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF3C4Q9UKN8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 AL391807.1-203ENST00000604392 2365 ntBASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 KRT8P50-201ENST00000562022 1438 ntBASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms