Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NECTIN3Q9NQS3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 MIR564-202ENST00000385049 94 ntBASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 YBX1P2-201ENST00000489612 999 ntBASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 AC011558.1-201ENST00000623459 338 ntBASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.53■□□□□ 0.4
NECTIN3Q9NQS3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 AK4P3-201ENST00000418260 669 ntBASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 DUX4L26-201ENST00000489078 1255 ntBASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 NEK4P2-201ENST00000580004 1012 ntBASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN3Q9NQS3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN3Q9NQS3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AL357033.4-201ENST00000617703 1807 ntBASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms