Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 AC104417.2-201ENST00000562989 1793 ntBASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 AC073592.3-201ENST00000625118 1834 ntBASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 PRELID1P1-202ENST00000567272 903 ntBASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 AC092119.3-201ENST00000612618 583 ntBASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 AC083906.6-201ENST00000641366 219 ntBASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 FEM1AP3-201ENST00000403722 1741 ntBASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPGRIP1Q96KN7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPGRIP1Q96KN7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.82
RPGRIP1Q96KN7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPGRIP1Q96KN7 SDHAP1-207ENST00000440850 2000 ntBASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 AP000523.1-201ENST00000398242 1049 ntBASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 AL845331.1-201ENST00000424978 1190 ntBASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 AP000347.1-202ENST00000435868 847 ntBASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 MIR3652-201ENST00000579335 131 ntBASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.14■□□□□ 0.81
RPGRIP1Q96KN7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RPGRIP1Q96KN7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.13■□□□□ 0.81
RPGRIP1Q96KN7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPGRIP1Q96KN7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPGRIP1Q96KN7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.13■□□□□ 0.81
RPGRIP1Q96KN7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms