Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 AC006557.6-201ENST00000623071 864 ntBASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 MIR6786-201ENST00000616843 113 ntBASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 AC108860.2-201ENST00000562760 2183 ntBASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COX4I2Q96KJ9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I2Q96KJ9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms