Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPG11Q96JI7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPG11Q96JI7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 AC112777.1-201ENST00000540175 1423 ntBASIC15.46■□□□□ 0.07
SPG11Q96JI7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 OR7E14P-202ENST00000530490 1290 ntBASIC15.46■□□□□ 0.07
SPG11Q96JI7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPG11Q96JI7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
SPG11Q96JI7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SPG11Q96JI7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPG11Q96JI7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 AFG3L1P-217ENST00000557444 2447 ntBASIC15.45■□□□□ 0.06
SPG11Q96JI7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 AC040169.1-201ENST00000565382 521 ntBASIC15.45■□□□□ 0.06
SPG11Q96JI7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 AL139288.1-201ENST00000623748 933 ntBASIC15.45■□□□□ 0.06
SPG11Q96JI7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 AC105339.3-201ENST00000560043 636 ntBASIC15.45■□□□□ 0.06
SPG11Q96JI7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SPG11Q96JI7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPG11Q96JI7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 AC007967.2-201ENST00000432613 625 ntBASIC15.44■□□□□ 0.06
SPG11Q96JI7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 AC009533.2-201ENST00000543664 586 ntBASIC15.44■□□□□ 0.06
SPG11Q96JI7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 AC004817.3-201ENST00000602957 2129 ntBASIC15.44■□□□□ 0.06
SPG11Q96JI7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.44■□□□□ 0.06
SPG11Q96JI7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPG11Q96JI7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.43■□□□□ 0.06
SPG11Q96JI7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 MTMR9LP-203ENST00000426597 1545 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms