Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 KRT18P27-201ENST00000427733 1299 ntBASIC22.16■■□□□ 1.14
SNED1Q8TER0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 AC112482.1-201ENST00000492080 688 ntBASIC22.16■■□□□ 1.14
SNED1Q8TER0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SNED1Q8TER0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNED1Q8TER0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 AC009947.1-201ENST00000444350 727 ntBASIC22.15■■□□□ 1.14
SNED1Q8TER0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.15■■□□□ 1.14
SNED1Q8TER0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 AP000867.4-201ENST00000641616 219 ntBASIC22.15■■□□□ 1.14
SNED1Q8TER0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNED1Q8TER0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.15■■□□□ 1.14
SNED1Q8TER0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
SNED1Q8TER0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SNED1Q8TER0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
SNED1Q8TER0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
SNED1Q8TER0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SNED1Q8TER0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 NKAPP1-205ENST00000585790 367 ntBASIC22.14■■□□□ 1.14
SNED1Q8TER0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SNED1Q8TER0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.14■■□□□ 1.14
SNED1Q8TER0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SNED1Q8TER0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNED1Q8TER0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNED1Q8TER0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.14■■□□□ 1.13
SNED1Q8TER0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.14■■□□□ 1.13
SNED1Q8TER0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.14■■□□□ 1.13
SNED1Q8TER0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.14■■□□□ 1.13
SNED1Q8TER0 MTDHP4-201ENST00000600287 670 ntBASIC22.14■■□□□ 1.13
SNED1Q8TER0 AC134684.3-201ENST00000641758 218 ntBASIC22.14■■□□□ 1.13
SNED1Q8TER0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNED1Q8TER0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.14■■□□□ 1.13
SNED1Q8TER0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SNED1Q8TER0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.13■■□□□ 1.13
SNED1Q8TER0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.13■■□□□ 1.13
SNED1Q8TER0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.13■■□□□ 1.13
SNED1Q8TER0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 LINC01126-201ENST00000623515 1646 ntBASIC22.13■■□□□ 1.13
SNED1Q8TER0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.13■■□□□ 1.13
SNED1Q8TER0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.13■■□□□ 1.13
SNED1Q8TER0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.13■■□□□ 1.13
SNED1Q8TER0 AC105339.3-201ENST00000560043 636 ntBASIC22.13■■□□□ 1.13
SNED1Q8TER0 LINC02084-201ENST00000606069 1096 ntBASIC22.13■■□□□ 1.13
SNED1Q8TER0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SNED1Q8TER0 AC099343.3-201ENST00000605834 2503 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms