Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC01554Q52M75 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PBX2P1-201ENST00000493219 1291 ntBASIC9.21□□□□□ -0.94
LINC01554Q52M75 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 REXO1L9P-201ENST00000604264 2108 ntBASIC9.21□□□□□ -0.94
LINC01554Q52M75 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 AC008175.2-201ENST00000612840 297 ntBASIC9.21□□□□□ -0.94
LINC01554Q52M75 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 AC055733.4-201ENST00000638462 1354 ntBASIC9.21□□□□□ -0.94
LINC01554Q52M75 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC01554Q52M75 DOC2GP-204ENST00000639052 2548 ntBASIC9.21□□□□□ -0.94
LINC01554Q52M75 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
LINC01554Q52M75 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 AC092171.3-201ENST00000610122 2651 ntBASIC9.2□□□□□ -0.94
LINC01554Q52M75 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 GRAMD4P4-201ENST00000613563 1115 ntBASIC9.2□□□□□ -0.94
LINC01554Q52M75 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 AC008406.3-201ENST00000620001 1374 ntBASIC9.2□□□□□ -0.94
LINC01554Q52M75 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01554Q52M75 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC01554Q52M75 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms