Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 TSPY22P-201ENST00000427496 604 ntBASIC16.4■□□□□ 0.22
CLDN15P56746 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN15P56746 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN15P56746 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN15P56746 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN15P56746 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 AL390719.2-201ENST00000606993 987 ntBASIC16.4■□□□□ 0.22
CLDN15P56746 NPAP1P7-201ENST00000613027 823 ntBASIC16.4■□□□□ 0.22
CLDN15P56746 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN15P56746 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN15P56746 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN15P56746 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN15P56746 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN15P56746 KRT89P-201ENST00000620027 1478 ntBASIC16.4■□□□□ 0.22
CLDN15P56746 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN15P56746 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN15P56746 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN15P56746 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN15P56746 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN15P56746 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.39■□□□□ 0.22
CLDN15P56746 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN15P56746 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 WIZP1-201ENST00000531444 2299 ntBASIC16.39■□□□□ 0.21
CLDN15P56746 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 AP002383.4-201ENST00000442518 975 ntBASIC16.39■□□□□ 0.21
CLDN15P56746 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 KRT8P26-201ENST00000534154 1276 ntBASIC16.39■□□□□ 0.21
CLDN15P56746 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.39■□□□□ 0.21
CLDN15P56746 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN15P56746 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN15P56746 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN15P56746 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN15P56746 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN15P56746 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN15P56746 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CLDN15P56746 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 AC073592.3-201ENST00000625118 1834 ntBASIC16.38■□□□□ 0.21
CLDN15P56746 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN15P56746 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN15P56746 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN15P56746 ATP5G2P1-201ENST00000433580 426 ntBASIC16.38■□□□□ 0.21
CLDN15P56746 BX276092.5-203ENST00000456199 560 ntBASIC16.38■□□□□ 0.21
CLDN15P56746 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN15P56746 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN15P56746 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN15P56746 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN15P56746 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms