Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB5AP20339 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
RAB5AP20339 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5AP20339 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB5AP20339 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
RAB5AP20339 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB5AP20339 LINC02228-204ENST00000642115 2962 ntBASIC14.23□□□□□ -0.13
RAB5AP20339 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB5AP20339 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB5AP20339 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 IGHV3-19-201ENST00000521488 291 ntBASIC14.23□□□□□ -0.13
RAB5AP20339 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RAB5AP20339 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB5AP20339 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.23□□□□□ -0.13
RAB5AP20339 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB5AP20339 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5AP20339 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5AP20339 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5AP20339 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5AP20339 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 SDHAP1-207ENST00000440850 2000 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB5AP20339 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB5AP20339 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB5AP20339 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB5AP20339 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 AL512631.2-201ENST00000604634 923 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 AC233992.3-201ENST00000607491 485 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 AC105917.1-201ENST00000506637 2539 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 AC022188.1-201ENST00000620960 1664 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 KRT8P20-201ENST00000423953 1409 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 AL662844.4-201ENST00000606367 2838 ntBASIC14.22□□□□□ -0.13
RAB5AP20339 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB5AP20339 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB5AP20339 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5AP20339 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5AP20339 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAB5AP20339 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5AP20339 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5AP20339 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5AP20339 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB5AP20339 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5AP20339 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RAB5AP20339 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB5AP20339 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5AP20339 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB5AP20339 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5AP20339 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB5AP20339 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5AP20339 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms