Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 TSPY5P-201ENST00000426936 936 ntBASIC18.57■□□□□ 0.56
CAPN8A6NHC0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 AC063952.2-201ENST00000498792 1227 ntBASIC18.57■□□□□ 0.56
CAPN8A6NHC0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 MIR3180-4-201ENST00000582223 153 ntBASIC18.57■□□□□ 0.56
CAPN8A6NHC0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN8A6NHC0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 MYLKP1-201ENST00000509077 1580 ntBASIC18.56■□□□□ 0.56
CAPN8A6NHC0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 HOMER2P1-201ENST00000455653 964 ntBASIC18.56■□□□□ 0.56
CAPN8A6NHC0 AC034232.1-201ENST00000506026 1064 ntBASIC18.56■□□□□ 0.56
CAPN8A6NHC0 AC022616.7-201ENST00000525383 220 ntBASIC18.56■□□□□ 0.56
CAPN8A6NHC0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 AP000550.4-202ENST00000639755 178 ntBASIC18.56■□□□□ 0.56
CAPN8A6NHC0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN8A6NHC0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.55■□□□□ 0.56
CAPN8A6NHC0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 MIR3917-201ENST00000580971 93 ntBASIC18.55■□□□□ 0.56
CAPN8A6NHC0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN8A6NHC0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms