Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 FAM207BP-201ENST00000447172 505 ntBASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AC011506.1-201ENST00000474329 610 ntBASIC16.57■□□□□ 0.24
HINT3Q9NQE9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AP003071.4-201ENST00000562276 1284 ntBASIC16.57■□□□□ 0.24
HINT3Q9NQE9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AC130371.2-201ENST00000619443 611 ntBASIC16.57■□□□□ 0.24
HINT3Q9NQE9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AL031985.4-201ENST00000642138 673 ntBASIC16.57■□□□□ 0.24
HINT3Q9NQE9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.56■□□□□ 0.24
HINT3Q9NQE9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 NUDT16P1-203ENST00000513809 620 ntBASIC16.56■□□□□ 0.24
HINT3Q9NQE9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.56■□□□□ 0.24
HINT3Q9NQE9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 AP000593.1-201ENST00000393668 712 ntBASIC16.55■□□□□ 0.24
HINT3Q9NQE9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HINT3Q9NQE9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms