Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 AL136038.3-201ENST00000561909 1096 ntBASIC12.76□□□□□ -0.37
UPK3BQ9BT76 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.76□□□□□ -0.37
UPK3BQ9BT76 AC024243.1-201ENST00000609234 778 ntBASIC12.76□□□□□ -0.37
UPK3BQ9BT76 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 SPDYE15P-201ENST00000424157 909 ntBASIC12.75□□□□□ -0.37
UPK3BQ9BT76 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 KRT18P38-201ENST00000449496 1282 ntBASIC12.75□□□□□ -0.37
UPK3BQ9BT76 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 AC104390.1-201ENST00000555663 520 ntBASIC12.75□□□□□ -0.37
UPK3BQ9BT76 AC009065.1-201ENST00000564055 1225 ntBASIC12.75□□□□□ -0.37
UPK3BQ9BT76 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 AC007613.1-201ENST00000572811 2597 ntBASIC12.75□□□□□ -0.37
UPK3BQ9BT76 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 AP000550.4-202ENST00000639755 178 ntBASIC12.75□□□□□ -0.37
UPK3BQ9BT76 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK3BQ9BT76 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 AP000997.3-201ENST00000623333 2250 ntBASIC12.74□□□□□ -0.37
UPK3BQ9BT76 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 HEIH-201ENST00000623091 1652 ntBASIC12.74□□□□□ -0.37
UPK3BQ9BT76 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 PKD1P5-201ENST00000532415 10291 ntBASIC12.74□□□□□ -0.37
UPK3BQ9BT76 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms