Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS1Q99742 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS1Q99742 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS1Q99742 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS1Q99742 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS1Q99742 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS1Q99742 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS1Q99742 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NPAS1Q99742 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS1Q99742 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS1Q99742 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPAS1Q99742 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS1Q99742 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS1Q99742 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPAS1Q99742 HYMAI.1-201ENST00000620949 238 ntBASIC16.68■□□□□ 0.26
NPAS1Q99742 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NPAS1Q99742 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS1Q99742 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 AP000997.3-201ENST00000623333 2250 ntBASIC16.68■□□□□ 0.26
NPAS1Q99742 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS1Q99742 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS1Q99742 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS1Q99742 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS1Q99742 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPAS1Q99742 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 AC090164.3-201ENST00000610780 2143 ntBASIC16.67■□□□□ 0.26
NPAS1Q99742 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS1Q99742 ESPNP-201ENST00000270691 2015 ntBASIC16.67■□□□□ 0.26
NPAS1Q99742 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NPAS1Q99742 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS1Q99742 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS1Q99742 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 STARP1-201ENST00000397973 869 ntBASIC16.67■□□□□ 0.26
NPAS1Q99742 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS1Q99742 FAM8A6P-201ENST00000407496 1135 ntBASIC16.67■□□□□ 0.26
NPAS1Q99742 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NPAS1Q99742 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPAS1Q99742 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS1Q99742 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS1Q99742 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS1Q99742 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NPAS1Q99742 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 MIR1224-201ENST00000408193 85 ntBASIC16.66■□□□□ 0.26
NPAS1Q99742 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS1Q99742 AC112907.2-201ENST00000448639 330 ntBASIC16.66■□□□□ 0.26
NPAS1Q99742 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS1Q99742 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS1Q99742 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.66■□□□□ 0.26
NPAS1Q99742 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS1Q99742 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS1Q99742 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS1Q99742 AC010331.1-201ENST00000611423 582 ntBASIC16.66■□□□□ 0.26
NPAS1Q99742 MYC-208ENST00000641036 567 ntBASIC16.66■□□□□ 0.26
NPAS1Q99742 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS1Q99742 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS1Q99742 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms