Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF440Q8IYI8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 AC087499.1-201ENST00000418141 1075 ntBASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 AC024243.1-201ENST00000609234 778 ntBASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 FLJ13224-201ENST00000313737 1514 ntBASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF440Q8IYI8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF440Q8IYI8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 AC138028.4-201ENST00000564984 1845 ntBASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 PHGDH-209ENST00000641074 1780 ntBASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF440Q8IYI8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms