Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 AC113410.3-201ENST00000623366 203 ntBASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 REXO1L9P-201ENST00000604264 2108 ntBASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 KRT8P45-201ENST00000414328 1447 ntBASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.32■□□□□ 0.52
CRLF3Q8IUI8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 HTR7P1-201ENST00000538670 1336 ntBASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 AC004264.1-201ENST00000608354 794 ntBASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 KRT8P41-201ENST00000533985 1514 ntBASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CRLF3Q8IUI8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 AL357033.4-201ENST00000617703 1807 ntBASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.3■□□□□ 0.52
CRLF3Q8IUI8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.29■□□□□ 0.52
CRLF3Q8IUI8 AC008556.1-201ENST00000610908 2040 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms