Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 UBA52-211ENST00000598814 550 ntTSL 1 (best)16.16■□□□□ 0.189e-9■□□□□ 10.3
SND1Q7KZF4 DDB1-220ENST00000542337 558 ntTSL 320.9■□□□□ 0.945e-7■□□□□ 10.3
SND1Q7KZF4 PIGT-219ENST00000638489 957 ntTSL 1 (best)16.22■□□□□ 0.193e-7■□□□□ 10.3
SND1Q7KZF4 PIGT-233ENST00000638953 952 ntTSL 512.7□□□□□ -0.383e-7■□□□□ 10.3
SND1Q7KZF4 PIGT-238ENST00000639194 439 ntTSL 510.71□□□□□ -0.693e-7■□□□□ 10.3
SND1Q7KZF4 LDHA-207ENST00000460405 680 ntTSL 310.46□□□□□ -0.734e-27■□□□□ 10.3
SND1Q7KZF4 DDB1-206ENST00000535283 1220 ntTSL 210.28□□□□□ -0.765e-7■□□□□ 10.3
SND1Q7KZF4 DDB1-210ENST00000538129 475 ntTSL 27.21□□□□□ -1.265e-7■□□□□ 10.3
SND1Q7KZF4 PSMA4-211ENST00000559154 637 ntTSL 210.1□□□□□ -0.792e-8■□□□□ 10.3
SND1Q7KZF4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.48□□□□□ -1.212e-8■□□□□ 10.3
SND1Q7KZF4 PGK1-202ENST00000474281 307 ntTSL 1 (best)7□□□□□ -1.291e-10■□□□□ 10.3
SND1Q7KZF4 TFR2-212ENST00000476304 2421 ntTSL 518.48■□□□□ 0.559e-7■□□□□ 10.3
SND1Q7KZF4 ITIH3-204ENST00000464804 543 ntTSL 417.3■□□□□ 0.365e-13■□□□□ 10.2
SND1Q7KZF4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.07■□□□□ 0.645e-16■□□□□ 10.2
SND1Q7KZF4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.53■□□□□ 0.565e-16■□□□□ 10.2
SND1Q7KZF4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.24■□□□□ 0.515e-16■□□□□ 10.2
SND1Q7KZF4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.475e-16■□□□□ 10.2
SND1Q7KZF4 NDUFB9-205ENST00000518657 672 ntTSL 28.48□□□□□ -1.055e-16■□□□□ 10.2
SND1Q7KZF4 EMP3-207ENST00000597529 437 ntTSL 211.07□□□□□ -0.648e-9■□□□□ 10.2
SND1Q7KZF4 SELENOI-203ENST00000447170 624 ntTSL 512.23□□□□□ -0.452e-8■□□□□ 10.2
SND1Q7KZF4 ALDOA-210ENST00000563987 586 ntTSL 211.12□□□□□ -0.634e-35■□□□□ 10.2
SND1Q7KZF4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.913e-9■□□□□ 10.2
SND1Q7KZF4 PTPN12-216ENST00000523952 500 ntTSL 49.71□□□□□ -0.863e-9■□□□□ 10.2
SND1Q7KZF4 PTPN12-209ENST00000460731 582 ntTSL 25.8□□□□□ -1.483e-9■□□□□ 10.2
SND1Q7KZF4 CYP2W1-203ENST00000415893 890 ntTSL 318.7■□□□□ 0.582e-8■□□□□ 10.2
SND1Q7KZF4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-10■□□□□ 10.2
SND1Q7KZF4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.79■□□□□ 0.285e-10■□□□□ 10.2
SND1Q7KZF4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.285e-10■□□□□ 10.2
SND1Q7KZF4 SYVN1-210ENST00000528487 775 ntTSL 514.52□□□□□ -0.092e-8■□□□□ 10.2
SND1Q7KZF4 SYVN1-208ENST00000527142 796 ntTSL 511.15□□□□□ -0.622e-8■□□□□ 10.2
SND1Q7KZF4 SYVN1-211ENST00000529207 811 ntTSL 59.56□□□□□ -0.882e-8■□□□□ 10.2
SND1Q7KZF4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.668e-7■□□□□ 10.2
SND1Q7KZF4 C3orf58-204ENST00000491798 416 ntTSL 516.94■□□□□ 0.38e-7■□□□□ 10.2
SND1Q7KZF4 C3orf58-206ENST00000493396 536 ntTSL 316.3■□□□□ 0.28e-7■□□□□ 10.2
SND1Q7KZF4 ITGAV-208ENST00000496854 611 ntTSL 38.37□□□□□ -1.077e-11■□□□□ 10.2
SND1Q7KZF4 ITGAV-206ENST00000474571 333 ntTSL 36.77□□□□□ -1.337e-11■□□□□ 10.2
SND1Q7KZF4 OAZ1-204ENST00000588673 780 ntTSL 321.08■□□□□ 0.977e-9■□□□□ 10.2
SND1Q7KZF4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.777e-9■□□□□ 10.2
SND1Q7KZF4 OAZ1-210ENST00000593012 1357 ntTSL 219.23■□□□□ 0.677e-9■□□□□ 10.2
SND1Q7KZF4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.577e-9■□□□□ 10.2
SND1Q7KZF4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.427e-9■□□□□ 10.2
SND1Q7KZF4 OAZ1-201ENST00000581150 1131 ntTSL 517.49■□□□□ 0.397e-9■□□□□ 10.2
SND1Q7KZF4 OAZ1-209ENST00000592787 857 ntTSL 216.92■□□□□ 0.37e-9■□□□□ 10.2
SND1Q7KZF4 OAZ1-207ENST00000590943 1012 ntTSL 216.71■□□□□ 0.277e-9■□□□□ 10.2
SND1Q7KZF4 TFR2-204ENST00000462090 1844 ntTSL 520.11■□□□□ 0.813e-7■□□□□ 10.2
SND1Q7KZF4 TFR2-213ENST00000490084 2196 ntTSL 218.72■□□□□ 0.593e-7■□□□□ 10.2
SND1Q7KZF4 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.93□□□□□ -0.829e-10■□□□□ 10.2
SND1Q7KZF4 COPE-205ENST00000595984 434 ntTSL 312.66□□□□□ -0.385e-9■□□□□ 10.2
SND1Q7KZF4 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.462e-8■□□□□ 10.2
SND1Q7KZF4 PSMB2-203ENST00000630477 1127 ntTSL 1 (best)10.7□□□□□ -0.72e-8■□□□□ 10.2
SND1Q7KZF4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.19□□□□□ -1.262e-8■□□□□ 10.2
SND1Q7KZF4 COL9A3-210ENST00000472880 959 ntTSL 320.37■□□□□ 0.854e-26■□□□□ 10.2
SND1Q7KZF4 CFB-277ENST00000467360 1082 ntTSL 510.53□□□□□ -0.728e-12■□□□□ 10.2
SND1Q7KZF4 OAZ1-203ENST00000586054 2832 nt23.53■■□□□ 1.369e-9■□□□□ 10.2
SND1Q7KZF4 ELOVL6-208ENST00000514184 607 ntTSL 36.66□□□□□ -1.341e-6■□□□□ 10.2
SND1Q7KZF4 BTN2A1-207ENST00000541522 2845 ntTSL 2 BASIC12.08□□□□□ -0.485e-6■□□□□ 10.2
SND1Q7KZF4 BTN2A1-206ENST00000493173 551 ntTSL 410.18□□□□□ -0.785e-6■□□□□ 10.2
SND1Q7KZF4 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC10.09□□□□□ -0.795e-6■□□□□ 10.2
SND1Q7KZF4 BTN2A1-202ENST00000377600 2989 ntTSL 59.92□□□□□ -0.825e-6■□□□□ 10.2
SND1Q7KZF4 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC9.6□□□□□ -0.875e-6■□□□□ 10.2
SND1Q7KZF4 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.995e-6■□□□□ 10.2
SND1Q7KZF4 SMIM7-217ENST00000599310 1123 ntTSL 217.03■□□□□ 0.322e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.13□□□□□ -0.312e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-216ENST00000598278 603 ntTSL 312.02□□□□□ -0.492e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-221ENST00000627144 2171 ntTSL 1 (best) BASIC11.2□□□□□ -0.622e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-209ENST00000487803 2190 ntTSL 1 (best)11.2□□□□□ -0.622e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-204ENST00000461488 569 ntTSL 310.61□□□□□ -0.712e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-206ENST00000465250 1281 ntTSL 210.43□□□□□ -0.742e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-207ENST00000481671 1126 ntTSL 210.41□□□□□ -0.742e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.752e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-211ENST00000593409 1757 ntTSL 510.34□□□□□ -0.752e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC10.26□□□□□ -0.772e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-206ENST00000594509 479 ntTSL 210.22□□□□□ -0.772e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-204ENST00000595505 400 ntTSL 210.04□□□□□ -0.82e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-220ENST00000602194 534 ntTSL 310.02□□□□□ -0.812e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-213ENST00000594662 1076 ntTSL 29.49□□□□□ -0.892e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-205ENST00000463051 602 ntTSL 39.35□□□□□ -0.912e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-202ENST00000397349 1122 ntTSL 28.93□□□□□ -0.982e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-201ENST00000593962 468 ntTSL 28.92□□□□□ -0.982e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-205ENST00000593459 222 ntAPPRIS P1 TSL 38.67□□□□□ -1.022e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-203ENST00000593991 548 ntTSL 28.67□□□□□ -1.022e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-215ENST00000597781 975 ntTSL 28.5□□□□□ -1.052e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-219ENST00000600740 580 ntTSL 38.2□□□□□ -1.12e-6■□□□□ 10.1
SND1Q7KZF4 AC008764.4-202ENST00000601636 437 ntTSL 37.72□□□□□ -1.172e-6■□□□□ 10.1
SND1Q7KZF4 SMIM7-210ENST00000593404 1065 ntTSL 27.02□□□□□ -1.292e-6■□□□□ 10.1
SND1Q7KZF4 C3-213ENST00000600744 708 ntTSL 515.14■□□□□ 0.012e-63■□□□□ 10.1
SND1Q7KZF4 COPB2-204ENST00000504295 3524 ntTSL 26.93□□□□□ -1.34e-6■□□□□ 10.1
SND1Q7KZF4 CABIN1-208ENST00000467937 593 ntTSL 319.27■□□□□ 0.683e-6■□□□□ 10.1
SND1Q7KZF4 SLC4A11-205ENST00000474451 3015 ntTSL 218.75■□□□□ 0.593e-6■□□□□ 10.1
SND1Q7KZF4 SLC4A11-206ENST00000488544 695 ntTSL 318.26■□□□□ 0.513e-6■□□□□ 10.1
SND1Q7KZF4 FCGRT-218ENST00000600273 582 ntTSL 217.55■□□□□ 0.41e-15■□□□□ 10.1
SND1Q7KZF4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.193e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-214ENST00000634810 5825 ntTSL 1 (best)15□□□□□ -0.013e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-210ENST00000634296 2328 ntTSL 514.78□□□□□ -0.043e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC14.48□□□□□ -0.093e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-207ENST00000466629 463 ntTSL 214.35□□□□□ -0.113e-6■□□□□ 10.1
SND1Q7KZF4 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.123e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.243e-6■□□□□ 10.1
SND1Q7KZF4 HSPG2-213ENST00000498495 488 ntTSL 213.28□□□□□ -0.283e-6■□□□□ 10.1
SND1Q7KZF4 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.313e-6■□□□□ 10.1
Retrieved 100 of 13,567 protein–RNA pairs in 89.3 ms