RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
PGK1-202ENST00000474281 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
PGK1-202ENST00000474281 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
PGK1-202ENST00000474281 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
PGK1-202ENST00000474281 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
PGK1-202ENST00000474281 ADRA2BP18089 450 aa11.62□□□□□ -0.55
PGK1-202ENST00000474281 KCNA4P22459 653 aa11.52□□□□□ -0.57
PGK1-202ENST00000474281 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
PGK1-202ENST00000474281 PPP6R1Q9UPN7 881 aa11.48□□□□□ -0.57
PGK1-202ENST00000474281 FOXD1Q16676 465 aa11.39□□□□□ -0.59
PGK1-202ENST00000474281 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
PGK1-202ENST00000474281 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
PGK1-202ENST00000474281 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
PGK1-202ENST00000474281 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
PGK1-202ENST00000474281 PIAS4Q8N2W9 510 aaPredicted RBP10.86□□□□□ -0.67
PGK1-202ENST00000474281 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
PGK1-202ENST00000474281 ZBTB22O15209 634 aa10.62□□□□□ -0.71
PGK1-202ENST00000474281 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
PGK1-202ENST00000474281 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
PGK1-202ENST00000474281 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
PGK1-202ENST00000474281 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
PGK1-202ENST00000474281 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
PGK1-202ENST00000474281 MAPK8IP2Q13387 824 aaPredicted RBP10.24□□□□□ -0.77
PGK1-202ENST00000474281 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
PGK1-202ENST00000474281 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
PGK1-202ENST00000474281 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
PGK1-202ENST00000474281 MSH5O43196 834 aa10.22□□□□□ -0.77
PGK1-202ENST00000474281 SLC4A2P04920 1241 aa10.04□□□□□ -0.8
PGK1-202ENST00000474281 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
PGK1-202ENST00000474281 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
PGK1-202ENST00000474281 FKBP8Q14318 412 aa9.97□□□□□ -0.81
PGK1-202ENST00000474281 DMRT2Q9Y5R5 561 aa9.96□□□□□ -0.82
PGK1-202ENST00000474281 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
PGK1-202ENST00000474281 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
PGK1-202ENST00000474281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
PGK1-202ENST00000474281 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
PGK1-202ENST00000474281 SAMD1Q6SPF0 538 aaPredicted RBP9.55□□□□□ -0.88
PGK1-202ENST00000474281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.51□□□□□ -0.892e-28■□□□□ 9.6
PGK1-202ENST00000474281 U3KPZ7 1027 aaPredicted RBP9.46□□□□□ -0.9
PGK1-202ENST00000474281 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
PGK1-202ENST00000474281 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
PGK1-202ENST00000474281 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
PGK1-202ENST00000474281 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.9
PGK1-202ENST00000474281 SPDYE4A6NLX3 237 aa9.35□□□□□ -0.91
PGK1-202ENST00000474281 PROM2Q8N271 834 aa9.33□□□□□ -0.92
PGK1-202ENST00000474281 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
PGK1-202ENST00000474281 APLP2Q06481 763 aa9.28□□□□□ -0.92
PGK1-202ENST00000474281 HAP1P54257 671 aaPredicted RBP9.27□□□□□ -0.93
PGK1-202ENST00000474281 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
PGK1-202ENST00000474281 IFNLR1Q8IU57 520 aaPredicted RBP9.24□□□□□ -0.93
PGK1-202ENST00000474281 BCANQ96GW7 911 aa9.21□□□□□ -0.94
PGK1-202ENST00000474281 DCAF8L2P0C7V8 631 aa9.19□□□□□ -0.94
PGK1-202ENST00000474281 PKD2Q13563 968 aa9.19□□□□□ -0.94
PGK1-202ENST00000474281 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
PGK1-202ENST00000474281 FBLN2P98095 1184 aa9.16□□□□□ -0.94
PGK1-202ENST00000474281 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
PGK1-202ENST00000474281 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
PGK1-202ENST00000474281 BBXQ8WY36 941 aaPredicted RBP9.06□□□□□ -0.96
PGK1-202ENST00000474281 POLA2Q14181 598 aa9.04□□□□□ -0.96
PGK1-202ENST00000474281 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.04□□□□□ -0.96
PGK1-202ENST00000474281 TRHP20396 242 aaPredicted RBP9.02□□□□□ -0.97
PGK1-202ENST00000474281 KDM2AQ9Y2K7 1162 aa9.02□□□□□ -0.97
PGK1-202ENST00000474281 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
PGK1-202ENST00000474281 NPM1P06748 294 aaKnown RBP eCLIP8.99□□□□□ -0.97
PGK1-202ENST00000474281 SPINK5Q9NQ38 1064 aaPredicted RBP8.99□□□□□ -0.97
PGK1-202ENST00000474281 ECM2O94769 699 aaPredicted RBP8.97□□□□□ -0.97
PGK1-202ENST00000474281 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
PGK1-202ENST00000474281 KLHL34Q8N239 644 aa8.96□□□□□ -0.98
PGK1-202ENST00000474281 TPRNQ4KMQ1 711 aa8.94□□□□□ -0.98
PGK1-202ENST00000474281 CFAP44Q96MT7 982 aa8.94□□□□□ -0.98
PGK1-202ENST00000474281 ZBTB12Q9Y330 459 aaPredicted RBP8.93□□□□□ -0.98
PGK1-202ENST00000474281 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
PGK1-202ENST00000474281 CAPN15O75808 1086 aa8.9□□□□□ -0.98
PGK1-202ENST00000474281 RGL2O15211 777 aa8.89□□□□□ -0.99
PGK1-202ENST00000474281 SPRYD3Q8NCJ5 442 aa8.89□□□□□ -0.99
PGK1-202ENST00000474281 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
PGK1-202ENST00000474281 RNF39Q9H2S5 420 aa8.84□□□□□ -0.99
PGK1-202ENST00000474281 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
PGK1-202ENST00000474281 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
PGK1-202ENST00000474281 ABCB7O75027 752 aa8.78□□□□□ -1
PGK1-202ENST00000474281 MIER1Q8N108 512 aa8.78□□□□□ -1
PGK1-202ENST00000474281 SSUH2Q9Y2M2 353 aa8.78□□□□□ -1
PGK1-202ENST00000474281 CHGAP10645 457 aaKnown RBP8.77□□□□□ -1.01
PGK1-202ENST00000474281 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
PGK1-202ENST00000474281 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1.01
PGK1-202ENST00000474281 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
PGK1-202ENST00000474281 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
PGK1-202ENST00000474281 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
PGK1-202ENST00000474281 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
PGK1-202ENST00000474281 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
PGK1-202ENST00000474281 TRIM41Q8WV44 630 aa8.71□□□□□ -1.02
PGK1-202ENST00000474281 NBR1Q14596 966 aa8.7□□□□□ -1.02
PGK1-202ENST00000474281 ZBTB47Q9UFB7 747 aaPredicted RBP8.7□□□□□ -1.02
PGK1-202ENST00000474281 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
PGK1-202ENST00000474281 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
PGK1-202ENST00000474281 PLEKHG5O94827 1062 aa8.67□□□□□ -1.02
PGK1-202ENST00000474281 DSG3P32926 999 aa8.64□□□□□ -1.03
PGK1-202ENST00000474281 RNF25Q96BH1 459 aaPredicted RBP8.6□□□□□ -1.03
PGK1-202ENST00000474281 GSE1Q14687 1217 aa8.59□□□□□ -1.03
PGK1-202ENST00000474281 GTPBP6O43824 516 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms