RNA–Protein interactions for RNA: ENST00000397349.6

SMIM7-202, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,122 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-202ENST00000397349 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
SMIM7-202ENST00000397349 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
SMIM7-202ENST00000397349 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.81
SMIM7-202ENST00000397349 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
SMIM7-202ENST00000397349 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
SMIM7-202ENST00000397349 FOXD1Q16676 465 aa18.42■□□□□ 0.54
SMIM7-202ENST00000397349 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
SMIM7-202ENST00000397349 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
SMIM7-202ENST00000397349 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
SMIM7-202ENST00000397349 ADRA2BP18089 450 aa17.41■□□□□ 0.38
SMIM7-202ENST00000397349 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
SMIM7-202ENST00000397349 MSH5O43196 834 aa17.1■□□□□ 0.33
SMIM7-202ENST00000397349 ABCC9O60706 1549 aa16.95■□□□□ 0.3
SMIM7-202ENST00000397349 ZCCHC6Q5VYS8 1495 aaKnown RBP16.81■□□□□ 0.28
SMIM7-202ENST00000397349 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
SMIM7-202ENST00000397349 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
SMIM7-202ENST00000397349 NACADO15069 1562 aa16.55■□□□□ 0.24
SMIM7-202ENST00000397349 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
SMIM7-202ENST00000397349 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
SMIM7-202ENST00000397349 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
SMIM7-202ENST00000397349 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
SMIM7-202ENST00000397349 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
SMIM7-202ENST00000397349 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
SMIM7-202ENST00000397349 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
SMIM7-202ENST00000397349 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
SMIM7-202ENST00000397349 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
SMIM7-202ENST00000397349 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMIM7-202ENST00000397349 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
SMIM7-202ENST00000397349 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
SMIM7-202ENST00000397349 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
SMIM7-202ENST00000397349 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
SMIM7-202ENST00000397349 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
SMIM7-202ENST00000397349 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
SMIM7-202ENST00000397349 MROH2BQ7Z745 1585 aa15.5■□□□□ 0.07
SMIM7-202ENST00000397349 WIZO95785 1651 aa15.46■□□□□ 0.07
SMIM7-202ENST00000397349 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
SMIM7-202ENST00000397349 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
SMIM7-202ENST00000397349 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
SMIM7-202ENST00000397349 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
SMIM7-202ENST00000397349 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
SMIM7-202ENST00000397349 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
SMIM7-202ENST00000397349 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
SMIM7-202ENST00000397349 TOP2AP11388 1531 aaKnown RBP15.24■□□□□ 0.03
SMIM7-202ENST00000397349 KCNA4P22459 653 aa15.23■□□□□ 0.03
SMIM7-202ENST00000397349 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
SMIM7-202ENST00000397349 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
SMIM7-202ENST00000397349 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
SMIM7-202ENST00000397349 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
SMIM7-202ENST00000397349 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
SMIM7-202ENST00000397349 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
SMIM7-202ENST00000397349 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
SMIM7-202ENST00000397349 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
SMIM7-202ENST00000397349 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
SMIM7-202ENST00000397349 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
SMIM7-202ENST00000397349 PRDM2Q13029 1718 aa15□□□□□ -0.01
SMIM7-202ENST00000397349 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
SMIM7-202ENST00000397349 NESP48681 1621 aa14.79□□□□□ -0.04
SMIM7-202ENST00000397349 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
SMIM7-202ENST00000397349 CFTRP13569 1480 aa14.77□□□□□ -0.04
SMIM7-202ENST00000397349 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
SMIM7-202ENST00000397349 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
SMIM7-202ENST00000397349 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
SMIM7-202ENST00000397349 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
SMIM7-202ENST00000397349 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
SMIM7-202ENST00000397349 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
SMIM7-202ENST00000397349 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
SMIM7-202ENST00000397349 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
SMIM7-202ENST00000397349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMIM7-202ENST00000397349 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
SMIM7-202ENST00000397349 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
SMIM7-202ENST00000397349 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
SMIM7-202ENST00000397349 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
SMIM7-202ENST00000397349 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
SMIM7-202ENST00000397349 DNMBPQ6XZF7 1577 aa14.53□□□□□ -0.08
SMIM7-202ENST00000397349 CUX1P39880 1505 aa14.53□□□□□ -0.08
SMIM7-202ENST00000397349 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
SMIM7-202ENST00000397349 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
SMIM7-202ENST00000397349 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
SMIM7-202ENST00000397349 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
SMIM7-202ENST00000397349 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
SMIM7-202ENST00000397349 WDR62O43379 1518 aa14.46□□□□□ -0.1
SMIM7-202ENST00000397349 FGD5Q6ZNL6 1462 aa14.42□□□□□ -0.1
SMIM7-202ENST00000397349 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
SMIM7-202ENST00000397349 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
SMIM7-202ENST00000397349 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
SMIM7-202ENST00000397349 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.11
SMIM7-202ENST00000397349 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
SMIM7-202ENST00000397349 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
SMIM7-202ENST00000397349 SOGA1O94964 1423 aa14.29□□□□□ -0.12
SMIM7-202ENST00000397349 CUX2O14529 1486 aa14.29□□□□□ -0.12
SMIM7-202ENST00000397349 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
SMIM7-202ENST00000397349 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
SMIM7-202ENST00000397349 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
SMIM7-202ENST00000397349 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
SMIM7-202ENST00000397349 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
SMIM7-202ENST00000397349 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
SMIM7-202ENST00000397349 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
SMIM7-202ENST00000397349 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
SMIM7-202ENST00000397349 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
SMIM7-202ENST00000397349 EEA1Q15075 1411 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms