RNA–Protein interactions for RNA: ENST00000474571.1

ITGAV-206, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 333 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-206ENST00000474571 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
ITGAV-206ENST00000474571 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
ITGAV-206ENST00000474571 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
ITGAV-206ENST00000474571 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
ITGAV-206ENST00000474571 FOXD1Q16676 465 aa17.92■□□□□ 0.46
ITGAV-206ENST00000474571 NISCHQ9Y2I1 1504 aa17.21■□□□□ 0.34
ITGAV-206ENST00000474571 MSH5O43196 834 aa16.91■□□□□ 0.3
ITGAV-206ENST00000474571 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
ITGAV-206ENST00000474571 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
ITGAV-206ENST00000474571 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
ITGAV-206ENST00000474571 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
ITGAV-206ENST00000474571 ADRA2BP18089 450 aa16.52■□□□□ 0.24
ITGAV-206ENST00000474571 ABCC9O60706 1549 aa16.16■□□□□ 0.18
ITGAV-206ENST00000474571 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
ITGAV-206ENST00000474571 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
ITGAV-206ENST00000474571 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
ITGAV-206ENST00000474571 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
ITGAV-206ENST00000474571 RB1CC1Q8TDY2 1594 aa15.17■□□□□ 0.02
ITGAV-206ENST00000474571 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
ITGAV-206ENST00000474571 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
ITGAV-206ENST00000474571 NACADO15069 1562 aa14.93□□□□□ -0.02
ITGAV-206ENST00000474571 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
ITGAV-206ENST00000474571 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
ITGAV-206ENST00000474571 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
ITGAV-206ENST00000474571 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
ITGAV-206ENST00000474571 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
ITGAV-206ENST00000474571 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
ITGAV-206ENST00000474571 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
ITGAV-206ENST00000474571 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
ITGAV-206ENST00000474571 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
ITGAV-206ENST00000474571 MYO15BQ96JP2 1530 aa14.53□□□□□ -0.08
ITGAV-206ENST00000474571 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
ITGAV-206ENST00000474571 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.09
ITGAV-206ENST00000474571 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
ITGAV-206ENST00000474571 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
ITGAV-206ENST00000474571 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
ITGAV-206ENST00000474571 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
ITGAV-206ENST00000474571 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
ITGAV-206ENST00000474571 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
ITGAV-206ENST00000474571 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
ITGAV-206ENST00000474571 C1QBPQ07021 282 aaKnown RBP14.15□□□□□ -0.14
ITGAV-206ENST00000474571 CUX2O14529 1486 aa14.12□□□□□ -0.15
ITGAV-206ENST00000474571 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
ITGAV-206ENST00000474571 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
ITGAV-206ENST00000474571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
ITGAV-206ENST00000474571 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
ITGAV-206ENST00000474571 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
ITGAV-206ENST00000474571 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
ITGAV-206ENST00000474571 NESP48681 1621 aa13.77□□□□□ -0.21
ITGAV-206ENST00000474571 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
ITGAV-206ENST00000474571 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
ITGAV-206ENST00000474571 ATAD2BQ9ULI0 1458 aa13.66□□□□□ -0.22
ITGAV-206ENST00000474571 HMGXB3Q12766 1538 aa13.65□□□□□ -0.22
ITGAV-206ENST00000474571 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
ITGAV-206ENST00000474571 LAMC3Q9Y6N6 1575 aa13.59□□□□□ -0.23
ITGAV-206ENST00000474571 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
ITGAV-206ENST00000474571 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
ITGAV-206ENST00000474571 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
ITGAV-206ENST00000474571 CAPN15O75808 1086 aa13.49□□□□□ -0.25
ITGAV-206ENST00000474571 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
ITGAV-206ENST00000474571 PEG3Q9GZU2 1588 aa13.44□□□□□ -0.26
ITGAV-206ENST00000474571 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
ITGAV-206ENST00000474571 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
ITGAV-206ENST00000474571 WDR62O43379 1518 aa13.43□□□□□ -0.26
ITGAV-206ENST00000474571 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
ITGAV-206ENST00000474571 DSG3P32926 999 aa13.37□□□□□ -0.27
ITGAV-206ENST00000474571 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
ITGAV-206ENST00000474571 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
ITGAV-206ENST00000474571 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
ITGAV-206ENST00000474571 KCNA4P22459 653 aa13.32□□□□□ -0.28
ITGAV-206ENST00000474571 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
ITGAV-206ENST00000474571 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
ITGAV-206ENST00000474571 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
ITGAV-206ENST00000474571 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
ITGAV-206ENST00000474571 POTEHQ6S545 545 aa13.22□□□□□ -0.29
ITGAV-206ENST00000474571 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
ITGAV-206ENST00000474571 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
ITGAV-206ENST00000474571 APLP2Q06481 763 aa13.21□□□□□ -0.29
ITGAV-206ENST00000474571 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
ITGAV-206ENST00000474571 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
ITGAV-206ENST00000474571 WIZO95785 1651 aa13.15□□□□□ -0.3
ITGAV-206ENST00000474571 ABCB7O75027 752 aa13.15□□□□□ -0.3
ITGAV-206ENST00000474571 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
ITGAV-206ENST00000474571 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
ITGAV-206ENST00000474571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
ITGAV-206ENST00000474571 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
ITGAV-206ENST00000474571 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
ITGAV-206ENST00000474571 CHD1O14646 1710 aa13.08□□□□□ -0.32
ITGAV-206ENST00000474571 CFTRP13569 1480 aa13.06□□□□□ -0.32
ITGAV-206ENST00000474571 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
ITGAV-206ENST00000474571 ZNF608Q9ULD9 1512 aaPredicted RBP13.05□□□□□ -0.32
ITGAV-206ENST00000474571 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
ITGAV-206ENST00000474571 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
ITGAV-206ENST00000474571 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
ITGAV-206ENST00000474571 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
ITGAV-206ENST00000474571 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
ITGAV-206ENST00000474571 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
ITGAV-206ENST00000474571 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
ITGAV-206ENST00000474571 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
ITGAV-206ENST00000474571 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms