RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
ITGAV-208ENST00000496854 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
ITGAV-208ENST00000496854 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
ITGAV-208ENST00000496854 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
ITGAV-208ENST00000496854 FOXD1Q16676 465 aa22.07■■□□□ 1.12
ITGAV-208ENST00000496854 PLPPR3Q6T4P5 718 aa21.85■■□□□ 1.09
ITGAV-208ENST00000496854 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
ITGAV-208ENST00000496854 ADRA2BP18089 450 aa21.02■□□□□ 0.96
ITGAV-208ENST00000496854 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
ITGAV-208ENST00000496854 MSH5O43196 834 aa20.47■□□□□ 0.87
ITGAV-208ENST00000496854 NISCHQ9Y2I1 1504 aa20.16■□□□□ 0.82
ITGAV-208ENST00000496854 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
ITGAV-208ENST00000496854 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
ITGAV-208ENST00000496854 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
ITGAV-208ENST00000496854 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
ITGAV-208ENST00000496854 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
ITGAV-208ENST00000496854 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
ITGAV-208ENST00000496854 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
ITGAV-208ENST00000496854 KCNA4P22459 653 aa18.48■□□□□ 0.55
ITGAV-208ENST00000496854 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
ITGAV-208ENST00000496854 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
ITGAV-208ENST00000496854 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
ITGAV-208ENST00000496854 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
ITGAV-208ENST00000496854 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
ITGAV-208ENST00000496854 ABCC9O60706 1549 aa18.2■□□□□ 0.5
ITGAV-208ENST00000496854 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
ITGAV-208ENST00000496854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
ITGAV-208ENST00000496854 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
ITGAV-208ENST00000496854 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
ITGAV-208ENST00000496854 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
ITGAV-208ENST00000496854 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ITGAV-208ENST00000496854 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
ITGAV-208ENST00000496854 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
ITGAV-208ENST00000496854 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
ITGAV-208ENST00000496854 NACADO15069 1562 aa17.14■□□□□ 0.33
ITGAV-208ENST00000496854 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
ITGAV-208ENST00000496854 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
ITGAV-208ENST00000496854 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
ITGAV-208ENST00000496854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
ITGAV-208ENST00000496854 ZBTB22O15209 634 aa16.97■□□□□ 0.31
ITGAV-208ENST00000496854 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
ITGAV-208ENST00000496854 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
ITGAV-208ENST00000496854 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
ITGAV-208ENST00000496854 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
ITGAV-208ENST00000496854 APLP2Q06481 763 aa16.86■□□□□ 0.29
ITGAV-208ENST00000496854 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
ITGAV-208ENST00000496854 CAPN15O75808 1086 aa16.85■□□□□ 0.29
ITGAV-208ENST00000496854 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
ITGAV-208ENST00000496854 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
ITGAV-208ENST00000496854 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
ITGAV-208ENST00000496854 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
ITGAV-208ENST00000496854 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
ITGAV-208ENST00000496854 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
ITGAV-208ENST00000496854 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
ITGAV-208ENST00000496854 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
ITGAV-208ENST00000496854 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
ITGAV-208ENST00000496854 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
ITGAV-208ENST00000496854 DSG3P32926 999 aa16.56■□□□□ 0.24
ITGAV-208ENST00000496854 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
ITGAV-208ENST00000496854 ABCB7O75027 752 aa16.49■□□□□ 0.23
ITGAV-208ENST00000496854 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
ITGAV-208ENST00000496854 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
ITGAV-208ENST00000496854 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
ITGAV-208ENST00000496854 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
ITGAV-208ENST00000496854 POLA2Q14181 598 aa16.35■□□□□ 0.21
ITGAV-208ENST00000496854 ZBTB12Q9Y330 459 aaPredicted RBP16.05■□□□□ 0.16
ITGAV-208ENST00000496854 FBLN2P98095 1184 aa15.91■□□□□ 0.14
ITGAV-208ENST00000496854 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
ITGAV-208ENST00000496854 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
ITGAV-208ENST00000496854 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
ITGAV-208ENST00000496854 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
ITGAV-208ENST00000496854 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
ITGAV-208ENST00000496854 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
ITGAV-208ENST00000496854 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
ITGAV-208ENST00000496854 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
ITGAV-208ENST00000496854 CUX2O14529 1486 aa15.71■□□□□ 0.1
ITGAV-208ENST00000496854 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
ITGAV-208ENST00000496854 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
ITGAV-208ENST00000496854 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
ITGAV-208ENST00000496854 NESP48681 1621 aa15.64■□□□□ 0.09
ITGAV-208ENST00000496854 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
ITGAV-208ENST00000496854 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
ITGAV-208ENST00000496854 SPDYE2BA6NHP3 402 aa15.58■□□□□ 0.08
ITGAV-208ENST00000496854 SPDYE6P0CI01 402 aa15.58■□□□□ 0.08
ITGAV-208ENST00000496854 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
ITGAV-208ENST00000496854 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
ITGAV-208ENST00000496854 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
ITGAV-208ENST00000496854 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
ITGAV-208ENST00000496854 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
ITGAV-208ENST00000496854 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
ITGAV-208ENST00000496854 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
ITGAV-208ENST00000496854 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
ITGAV-208ENST00000496854 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
ITGAV-208ENST00000496854 WIZO95785 1651 aa15.4■□□□□ 0.06
ITGAV-208ENST00000496854 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
ITGAV-208ENST00000496854 PDS5BQ9NTI5 1447 aa15.33■□□□□ 0.04
ITGAV-208ENST00000496854 WDR62O43379 1518 aa15.29■□□□□ 0.04
ITGAV-208ENST00000496854 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
ITGAV-208ENST00000496854 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.04
ITGAV-208ENST00000496854 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms