RNA–Protein interactions for RNA: ENST00000627144.2

SMIM7-221, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-221ENST00000627144 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
SMIM7-221ENST00000627144 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
SMIM7-221ENST00000627144 ZCCHC6Q5VYS8 1495 aaKnown RBP18.59■□□□□ 0.57
SMIM7-221ENST00000627144 ABCC9O60706 1549 aa18.51■□□□□ 0.55
SMIM7-221ENST00000627144 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
SMIM7-221ENST00000627144 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
SMIM7-221ENST00000627144 DCAF1Q9Y4B6 1507 aa18.3■□□□□ 0.52
SMIM7-221ENST00000627144 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
SMIM7-221ENST00000627144 NACADO15069 1562 aa18.01■□□□□ 0.47
SMIM7-221ENST00000627144 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
SMIM7-221ENST00000627144 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
SMIM7-221ENST00000627144 SCRIBQ14160 1630 aa17.75■□□□□ 0.43
SMIM7-221ENST00000627144 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
SMIM7-221ENST00000627144 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMIM7-221ENST00000627144 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
SMIM7-221ENST00000627144 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
SMIM7-221ENST00000627144 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
SMIM7-221ENST00000627144 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
SMIM7-221ENST00000627144 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.32
SMIM7-221ENST00000627144 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
SMIM7-221ENST00000627144 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
SMIM7-221ENST00000627144 WIZO95785 1651 aa16.97■□□□□ 0.31
SMIM7-221ENST00000627144 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
SMIM7-221ENST00000627144 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
SMIM7-221ENST00000627144 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
SMIM7-221ENST00000627144 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
SMIM7-221ENST00000627144 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
SMIM7-221ENST00000627144 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
SMIM7-221ENST00000627144 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
SMIM7-221ENST00000627144 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
SMIM7-221ENST00000627144 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
SMIM7-221ENST00000627144 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
SMIM7-221ENST00000627144 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
SMIM7-221ENST00000627144 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
SMIM7-221ENST00000627144 HRCP23327 699 aa16.6■□□□□ 0.25
SMIM7-221ENST00000627144 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
SMIM7-221ENST00000627144 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
SMIM7-221ENST00000627144 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
SMIM7-221ENST00000627144 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
SMIM7-221ENST00000627144 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
SMIM7-221ENST00000627144 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.19
SMIM7-221ENST00000627144 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
SMIM7-221ENST00000627144 CFTRP13569 1480 aa16.25■□□□□ 0.19
SMIM7-221ENST00000627144 EEA1Q15075 1411 aa16.24■□□□□ 0.19
SMIM7-221ENST00000627144 NESP48681 1621 aa16.2■□□□□ 0.18
SMIM7-221ENST00000627144 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
SMIM7-221ENST00000627144 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
SMIM7-221ENST00000627144 SOGA1O94964 1423 aa16.19■□□□□ 0.18
SMIM7-221ENST00000627144 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
SMIM7-221ENST00000627144 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
SMIM7-221ENST00000627144 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
SMIM7-221ENST00000627144 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
SMIM7-221ENST00000627144 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
SMIM7-221ENST00000627144 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
SMIM7-221ENST00000627144 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
SMIM7-221ENST00000627144 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
SMIM7-221ENST00000627144 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
SMIM7-221ENST00000627144 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
SMIM7-221ENST00000627144 GOLGA3Q08378 1498 aa16.06■□□□□ 0.16
SMIM7-221ENST00000627144 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
SMIM7-221ENST00000627144 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
SMIM7-221ENST00000627144 KIF21BO75037 1637 aa16.01■□□□□ 0.15
SMIM7-221ENST00000627144 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
SMIM7-221ENST00000627144 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
SMIM7-221ENST00000627144 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
SMIM7-221ENST00000627144 CUX1P39880 1505 aa15.96■□□□□ 0.15
SMIM7-221ENST00000627144 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
SMIM7-221ENST00000627144 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
SMIM7-221ENST00000627144 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
SMIM7-221ENST00000627144 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
SMIM7-221ENST00000627144 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
SMIM7-221ENST00000627144 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
SMIM7-221ENST00000627144 MYT1Q01538 1121 aa15.84■□□□□ 0.13
SMIM7-221ENST00000627144 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
SMIM7-221ENST00000627144 CLIP1P30622 1438 aa15.82■□□□□ 0.12
SMIM7-221ENST00000627144 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
SMIM7-221ENST00000627144 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
SMIM7-221ENST00000627144 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
SMIM7-221ENST00000627144 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
SMIM7-221ENST00000627144 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.12
SMIM7-221ENST00000627144 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
SMIM7-221ENST00000627144 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
SMIM7-221ENST00000627144 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
SMIM7-221ENST00000627144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
SMIM7-221ENST00000627144 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
SMIM7-221ENST00000627144 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
SMIM7-221ENST00000627144 WDR62O43379 1518 aa15.71■□□□□ 0.11
SMIM7-221ENST00000627144 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.11
SMIM7-221ENST00000627144 CUX2O14529 1486 aa15.68■□□□□ 0.1
SMIM7-221ENST00000627144 ABCA10Q8WWZ4 1543 aa15.65■□□□□ 0.1
SMIM7-221ENST00000627144 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
SMIM7-221ENST00000627144 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
SMIM7-221ENST00000627144 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
SMIM7-221ENST00000627144 IGF1RP08069 1367 aa15.61■□□□□ 0.09
SMIM7-221ENST00000627144 APLP2Q06481 763 aa15.6■□□□□ 0.09
SMIM7-221ENST00000627144 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
SMIM7-221ENST00000627144 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
SMIM7-221ENST00000627144 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMIM7-221ENST00000627144 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
SMIM7-221ENST00000627144 RANGAP1P46060 587 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms